Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs45593739 chr13:46961300 T/C 6.35E-7 289 25.02 30.2 23.23 KM Plot
KIRP rs45601235 chr13:46961241 A/C 6.35E-7 289 25.02 30.2 23.23 KM Plot
KIRP rs4572092 chr11:47094546 G/A 2.7E-6 287 25.02 31.87 12.63 KM Plot
KIRP rs4585968 chr1:26535146 G/A 5.32E-5 281 25.93 29.67 13.17 KM Plot
KIRP rs4587637 chr10:23581806 C/A 2.74E-5 289 26.18 23.17 10.3 KM Plot
KIRP rs4597303 chr16:88763561 T/C 2.19E-8 281 9.77 23.1 26.38 KM Plot
KIRP rs4657471 chr1:165686873 T/C 0.000175 287 17.8 43.63 23.52 KM Plot
KIRP rs4679394 chr3:124646837 G/A 0.000141 284 26.28 25.63 17.9 KM Plot
KIRP rs4684954 chr3:13599878 C/T 5.88E-5 283 18.2 26.4 25.63 KM Plot
KIRP rs4701191 chr5:178958041 G/T 5.92E-8 275 9.77 26.38 24.48 KM Plot
KIRP rs4704731 chr5:156461593 C/G 8.88E-8 284 12.78 22.57 26.37 KM Plot
KIRP rs4704832 chr5:156435250 A/T 1.2E-7 288 12.78 25.18 26.28 KM Plot
KIRP rs4704837 chr5:156464212 T/G 1.22E-7 285 12.78 23.68 26.37 KM Plot
KIRP rs4704839 chr5:156484626 A/T 2.22E-6 279 12.1 26.4 26 KM Plot
KIRP rs4704840 chr5:156484648 G/C 1.25E-6 281 12.1 25.98 26.1 KM Plot